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Isidore Rigoutsos, PhD

Contact Dr. Rigoutsos

1020 Locust Street
Room M81 Alumni Hall
Philadelphia, PA 19107

(215) 503-6152
(215) 503-0466 fax

Most Recent Peer-reviewed Publications

  1. Increasing cell density globally enhances the biogenesis of Piwi-interacting RNAs in Bombyx mori germ cells
  2. The biogenesis pathway of tRNA-derived piRNAs in Bombyx germ cells
  3. Integrated Genomic Characterization of Pancreatic Ductal Adenocarcinoma
  4. An miRNA expression signature for the human colonic stem cell niche distinguishes malignant from normal epithelia
  5. Threshold-seq: A tool for determining the threshold in short RNA-seq datasets
  6. N-BLR, a primate-specific non-coding transcript leads to colorectal cancer invasion and migration
  7. YAMAT-seq: An efficient method for high-throughput sequencing of mature transfer RNAs
  8. MINTmap: Fast and exhaustive profiling of nuclear and mitochondrial tRNA fragments from short RNA-seq data
  9. Post-transcriptional regulation of BRCA2 through interactions with miR-19a and miR-19b
  10. MINTbase: A framework for the interactive exploration of mitochondrial and nuclear tRNA fragments
  11. Integrative Multi-omic Analysis of Human Platelet eQTLs Reveals Alternative Start Site in Mitofusin 2
  12. The mRNA-binding protein HuR promotes hypoxia-induced chemoresistance through posttranscriptional regulation of the proto-oncogene PIM1 in pancreatic cancer cells
  13. Consequential considerations when mapping tRNA fragments
  14. Knowledge about the presence or absence of miRNA isoforms (isomiRs) can successfully discriminate amongst 32 TCGA cancer types
  15. Aging-associated changes in microRNA expression profile of internal anal sphincter smooth muscle: Role of microRNA-133a
  16. Multi-focal control of mitochondrial gene expression by oncogenic MYC provides potential therapeutic targets in cancer
  17. Beyond the one-locus-one-miRNA paradigm: microRNA isoforms enable deeper insights into breast cancer heterogeneity
  18. Sex hormone-dependent tRNA halves enhance cell proliferation in breast and prostate cancers
  19. Reply to Backes and Keller: Identification of novel tissue-specific and primate-specific human microRNAs
  20. Analysis of 13 cell types reveals evidence for the expression of numerous novel primate- And tissue-specific microRNAs