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Isidore Rigoutsos, PhD

Contact Dr. Rigoutsos

1020 Locust Street
Room M81 Alumni Hall
Philadelphia, PA 19107

(215) 503-6152
(215) 503-0466 fax

Most Recent Peer-reviewed Publications

  1. Increasing cell density globally enhances the biogenesis of Piwi-interacting RNAs in Bombyx mori germ cells
  2. Integrated Genomic Characterization of Pancreatic Ductal Adenocarcinoma
  3. An miRNA expression signature for the human colonic stem cell niche distinguishes malignant from normal epithelia
  4. Threshold-seq: A tool for determining the threshold in short RNA-seq datasets
  5. N-BLR, a primate-specific non-coding transcript leads to colorectal cancer invasion and migration
  6. MINTmap: Fast and exhaustive profiling of nuclear and mitochondrial tRNA fragments from short RNA-seq data
  7. Post-transcriptional regulation of BRCA2 through interactions with miR-19a and miR-19b
  8. MINTbase: A framework for the interactive exploration of mitochondrial and nuclear tRNA fragments
  9. Integrative Multi-omic Analysis of Human Platelet eQTLs Reveals Alternative Start Site in Mitofusin 2
  10. The mRNA-binding protein HuR promotes hypoxia-induced chemoresistance through posttranscriptional regulation of the proto-oncogene PIM1 in pancreatic cancer cells
  11. Consequential considerations when mapping tRNA fragments
  12. Aging-associated changes in microRNA expression profile of internal anal sphincter smooth muscle: Role of microRNA-133a
  13. Knowledge about the presence or absence of miRNA isoforms (isomiRs) can successfully discriminate amongst 32 TCGA cancer types
  14. Multi-focal control of mitochondrial gene expression by oncogenic MYC provides potential therapeutic targets in cancer
  15. Beyond the one-locus-one-miRNA paradigm: microRNA isoforms enable deeper insights into breast cancer heterogeneity
  16. Sex hormone-dependent tRNA halves enhance cell proliferation in breast and prostate cancers
  17. Reply to Backes and Keller: Identification of novel tissue-specific and primate-specific human microRNAs
  18. Analysis of 13 cell types reveals evidence for the expression of numerous novel primate- And tissue-specific microRNAs
  19. "Off-Spotter": Very fast and exhaustive enumeration of genomic lookalikes for designing CRISPR/Cas guide RNAs
  20. Post-transcriptional regulation of BRCA1 through its coding sequence by the miR-15/107 group of miRNAs