Pattern discovery; motif discovery; regulatory motifs; microRNAs; miRNAs; piRNAs; microRNA and piRNA targeting; non-coding RNAs; RNAi; RNA interference; retrotransposons; cell process regulation; genomics; computational genetics; computational medicine; diagnostics; therapeutics; high-throughput sequencing analysis; microbial genomics; metagenomics; high performance computing.
Isidore Rigoutsos, PhD
Richard W. Hevner Professor in Computational Medicine, Department of Pathology & Genomic Medicine
Director, Center for Computational Medicine
Contact Information
1020 Locust Street
Room M81 Alumni Hall
Philadelphia, PA 19107
215-503-6152
215-503-0466 fax
Richard W. Hevner Professor in Computational Medicine, Department of Pathology & Genomic Medicine
Director, Center for Computational Medicine
Research & Clinical Interests
Education
PhD, New York University (1992)
MSc, New York University (1989)
MSc, University of Rochester (1987)
BSc, National University of Athens (1984)
Most Recent Peer-Reviewed Publications
- Several novel classes of small regulatory RNAs show widespread changes in schizophrenia and bipolar disorder and extensive linkages to critical brain processes
- Fraction-Seq: An Integrated Experimental and Computational Workflow for Determining the Localization and Abundance of Small Non-Coding RNAs in Subcellular Compartments
- Mitochondrial tRNA-Derived Fragments as Candidate Metastasis-Modifying RNA
- Organism-Specific Sequence Motifs Link Ribosomal RNAs to Brain Disorders
- Re-Analyses of Samples From Amyotrophic Lateral Sclerosis Patients and Controls Identify Many Novel Small RNAs With Diagnostic And Prognostic Potential
Professional Societies
IEEE, AIMBE, AAAS, AACR
Laboratory Facilities
327 Alumni Hall – Computational Medicine