Pattern discovery; motif discovery; regulatory motifs; microRNAs; miRNAs; piRNAs; microRNA and piRNA targeting; non-coding RNAs; RNAi; RNA interference; retrotransposons; cell process regulation; genomics; computational genetics; computational medicine; diagnostics; therapeutics; high-throughput sequencing analysis; microbial genomics; metagenomics; high performance computing.
Isidore Rigoutsos, PhD
Richard W. Hevner Professor in Computational Medicine, Department of Pathology & Genomic Medicine
Director, Center for Computational Medicine
Contact Information
1020 Locust Street
Room M81 Alumni Hall
Philadelphia, PA 19107
215-503-6152
215-503-0466 fax
Richard W. Hevner Professor in Computational Medicine, Department of Pathology & Genomic Medicine
Director, Center for Computational Medicine
Research & Clinical Interests
Education
PhD, New York University (1992)
MSc, New York University (1989)
MSc, University of Rochester (1987)
BSc, National University of Athens (1984)
Most Recent Peer-Reviewed Publications
- Several novel classes of small regulatory RNAs show widespread changes in schizophrenia and bipolar disorder and extensive linkages to critical brain processes
- Organism-Specific Sequence Motifs Link Ribosomal RNAs to Brain Disorders
- Re-Analyses of Samples From Amyotrophic Lateral Sclerosis Patients and Controls Identify Many Novel Small RNAs With Diagnostic And Prognostic Potential
- CorrAdjust unveils biologically relevant transcriptomic correlations by efficiently eliminating hidden confounders
- The subcellular distribution of miRNA isoforms, tRNA-derived fragments, and rRNA-derived fragments depends on nucleotide sequence and cell type
Professional Societies
IEEE, AIMBE, AAAS, AACR
Laboratory Facilities
327 Alumni Hall – Computational Medicine